plot_boot_cumrisk.Rdplot_boot_cumrisk is a function that takes as an argument a list of cumrisk
objects, or the objects provided as independent arguments, each representing a
set of cumulative incidence functions. The
function returns paneled ggplot2 object depicting each set of cumulative risk
functions and their estimated 95% confidence intervals. This function is
also dispatched by calls to the generic plot function when passed a
cumrisk object.
plot_boot_cumrisk(
...,
rd = FALSE,
overlay = FALSE,
smooth = FALSE,
ncol = 2,
panel_dim = 1,
time_lab,
alpha = 0.05,
scales = "free_y",
stepribbon = TRUE,
legend_title = "Treatment \nGroups",
colors = "Dark2",
ref = 1
)cumrisk objects supplied as a list or as seperate arguments
A flag to indicate whether the risk difference should be plotted or the individual risk functions.
A flag to indicate that the risk difference curves should be overlayed rather than paneled
A flag to indicate the use of LOESS smoothing for risk difference
The number of columns for the faceting.
The number of dimensions for the faceting (either 1 or 2). Panels are faceted using the first (and if panel_dim = 2) and second elements of the labels vector in the supplied objects.
A numeric vector denoting the x-axis tick marks to be labeled.
Default is the ggplot2 default. Setting the parameter to NULL suppressed
labeling.
The desired nominal significance level of the confidence intervals.
A ggplot2 option for facet_grid/facet_wrap that controls the
scales on facted plots. It can be fixed ("fixed"), free ("free"), or free in
one dimension ("free.x", "free.y"). The default is "free.y."
A flag to determine whether to force the confidence intervals to be plotted using the stepribbon geom. The default is TRUE.
A string used to title the legend, default is "Treatment Groups"
Set colors for resulting ggplot object. Either a vector of strings which are interpreted as RGB codes or a sinlge string that identifies a color brewer palette. If set to NULL, plot.cumrisk will use grey shades. As a default, plot.cumrisk uses the color brewer palette 'Dark2'.
Identifies the treatmet group in the supplied object(s) to be used as a referent category for risk differecence curves. Defaults to one.
A ggplot2 object that can be further modified by the user before
plotting.